Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Gm9908-201ENSMUST00000211534 448 ntBASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc38Q8CDN8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ccdc38Q8CDN8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Gm8805-201ENSMUST00000117848 313 ntBASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc38Q8CDN8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms