Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lrif1Q8CDD9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lrif1Q8CDD9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Lrif1Q8CDD9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lrif1Q8CDD9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lrif1Q8CDD9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lrif1Q8CDD9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Gm15240-201ENSMUST00000118156 720 ntBASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lrif1Q8CDD9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Gm11918-201ENSMUST00000121660 179 ntBASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lrif1Q8CDD9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms