Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.41□□□□□ -0.58
Ube3dQ8BX13 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.41□□□□□ -0.58
Ube3dQ8BX13 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Gm12203-201ENSMUST00000118235 598 ntBASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Gm12209-201ENSMUST00000120089 596 ntBASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Gm27331-201ENSMUST00000183705 60 ntBASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Mir7221-201ENSMUST00000184009 72 ntBASIC11.4□□□□□ -0.58
Ube3dQ8BX13 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.4□□□□□ -0.58
Ube3dQ8BX13 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube3dQ8BX13 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms