Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab11fip4Q8BQP8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab11fip4Q8BQP8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.21□□□□□ -0.13
Rab11fip4Q8BQP8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.21□□□□□ -0.13
Rab11fip4Q8BQP8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab11fip4Q8BQP8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rab11fip4Q8BQP8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rab11fip4Q8BQP8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab11fip4Q8BQP8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab11fip4Q8BQP8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab11fip4Q8BQP8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab11fip4Q8BQP8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Gm37008-201ENSMUST00000195712 319 ntBASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab11fip4Q8BQP8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab11fip4Q8BQP8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Rab11fip4Q8BQP8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms