Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm25948-201ENSMUST00000175334 112 ntBASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm10766-202ENSMUST00000194123 606 ntBASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Shd-206ENSMUST00000225145 998 ntBASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm10175-201ENSMUST00000086013 645 ntBASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smco3Q8BQM7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.52□□□□□ -0.73
Smco3Q8BQM7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.52□□□□□ -0.73
Smco3Q8BQM7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Smco3Q8BQM7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms