Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Gm6266-201ENSMUST00000203844 806 ntBASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Itm2b-204ENSMUST00000228637 783 ntBASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh20Q8BIZ0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Paupar-201ENSMUST00000194826 3482 ntBASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm5687-201ENSMUST00000118252 640 ntBASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm29608-201ENSMUST00000190444 463 ntBASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm26315-201ENSMUST00000083890 321 ntBASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh20Q8BIZ0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Gm18062-201ENSMUST00000208020 547 ntBASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Gm18055-201ENSMUST00000208254 547 ntBASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Gm25857-201ENSMUST00000082788 129 ntBASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh20Q8BIZ0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms