Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Samm50Q8BGH2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Samm50Q8BGH2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.02■□□□□ -0
Samm50Q8BGH2 Gm12390-201ENSMUST00000117897 397 ntBASIC15.02■□□□□ -0
Samm50Q8BGH2 Gm5687-201ENSMUST00000118252 640 ntBASIC15.02■□□□□ -0
Samm50Q8BGH2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Samm50Q8BGH2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.02■□□□□ -0
Samm50Q8BGH2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.02■□□□□ -0
Samm50Q8BGH2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Samm50Q8BGH2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.02■□□□□ -0
Samm50Q8BGH2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.02■□□□□ -0
Samm50Q8BGH2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.02■□□□□ -0
Samm50Q8BGH2 Gm18062-201ENSMUST00000208020 547 ntBASIC15.02■□□□□ -0
Samm50Q8BGH2 Gm18055-201ENSMUST00000208254 547 ntBASIC15.02■□□□□ -0
Samm50Q8BGH2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.02■□□□□ -0
Samm50Q8BGH2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Samm50Q8BGH2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Samm50Q8BGH2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.02□□□□□ -0.01
Samm50Q8BGH2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Samm50Q8BGH2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Gm29649-201ENSMUST00000185649 419 ntBASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Samm50Q8BGH2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gm13050-201ENSMUST00000122149 1345 ntBASIC15□□□□□ -0.01
Samm50Q8BGH2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gm11425-201ENSMUST00000119608 498 ntBASIC15□□□□□ -0.01
Samm50Q8BGH2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gm11400-201ENSMUST00000120853 1214 ntBASIC15□□□□□ -0.01
Samm50Q8BGH2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gm8835-201ENSMUST00000173096 1169 ntBASIC15□□□□□ -0.01
Samm50Q8BGH2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15□□□□□ -0.01
Samm50Q8BGH2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Samm50Q8BGH2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15□□□□□ -0.01
Samm50Q8BGH2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Samm50Q8BGH2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms