Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Mir1894-201ENSMUST00000122802 81 ntBASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Gm25116-201ENSMUST00000157191 122 ntBASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Gm9794-201ENSMUST00000202370 423 ntBASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc116Q80X53 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm12490-201ENSMUST00000120255 560 ntBASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm22121-201ENSMUST00000175148 54 ntBASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm5356-201ENSMUST00000093326 615 ntBASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc116Q80X53 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.53□□□□□ -0.4
Ccdc116Q80X53 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc116Q80X53 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms