Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Gm13492-201ENSMUST00000119772 665 ntBASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Gm14760-201ENSMUST00000121831 999 ntBASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Gm6222-202ENSMUST00000182143 629 ntBASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpp38Q80UU2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rpp38Q80UU2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpp38Q80UU2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rpp38Q80UU2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.77□□□□□ -0.36
Rpp38Q80UU2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpp38Q80UU2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rpp38Q80UU2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpp38Q80UU2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.77□□□□□ -0.36
Rpp38Q80UU2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Gm16379-201ENSMUST00000161469 348 ntBASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Gm8762-201ENSMUST00000193486 339 ntBASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rpp38Q80UU2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.76□□□□□ -0.37
Rpp38Q80UU2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Gm11425-201ENSMUST00000119608 498 ntBASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Gm11964-201ENSMUST00000120982 444 ntBASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Gm7809-201ENSMUST00000153199 742 ntBASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Gm27514-201ENSMUST00000183692 110 ntBASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpp38Q80UU2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms