Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Gm13813-201ENSMUST00000120998 787 ntBASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Morn2-202ENSMUST00000227729 656 ntBASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Gm12217-201ENSMUST00000118858 696 ntBASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Gm13369-201ENSMUST00000119442 987 ntBASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Gm13097-201ENSMUST00000210722 397 ntBASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prpf38bQ80SY5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Prpf38bQ80SY5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.46□□□□□ -0.26
Prpf38bQ80SY5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Prpf38bQ80SY5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Prpf38bQ80SY5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Prpf38bQ80SY5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Prpf38bQ80SY5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm9550-201ENSMUST00000161130 862 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Mir6927-201ENSMUST00000184494 71 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.45□□□□□ -0.26
Prpf38bQ80SY5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms