Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.89□□□□□ -0.51
Pif1Q80SX8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.89□□□□□ -0.51
Pif1Q80SX8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.89□□□□□ -0.51
Pif1Q80SX8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pif1Q80SX8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.88□□□□□ -0.51
Pif1Q80SX8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Mir7070-201ENSMUST00000183657 86 ntBASIC11.88□□□□□ -0.51
Pif1Q80SX8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Gm31256-201ENSMUST00000194705 506 ntBASIC11.88□□□□□ -0.51
Pif1Q80SX8 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.88□□□□□ -0.51
Pif1Q80SX8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pif1Q80SX8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms