Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Mir6392-201ENSMUST00000184924 108 ntBASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ctdp1Q7TSG2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Gm38144-201ENSMUST00000192790 465 ntBASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Gm9794-201ENSMUST00000202370 423 ntBASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ctdp1Q7TSG2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ctdp1Q7TSG2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctdp1Q7TSG2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctdp1Q7TSG2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctdp1Q7TSG2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctdp1Q7TSG2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Gm14928-201ENSMUST00000120198 477 ntBASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.95□□□□□ -0.18
Ctdp1Q7TSG2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms