Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm16296-201ENSMUST00000159905 325 ntBASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Gm45770-201ENSMUST00000212105 616 ntBASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Gm5051-201ENSMUST00000204085 485 ntBASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Snrnp40Q6PE01 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm13408-201ENSMUST00000119822 798 ntBASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm13935-201ENSMUST00000121859 798 ntBASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm14665-201ENSMUST00000122294 557 ntBASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm27438-201ENSMUST00000183480 110 ntBASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm27627-201ENSMUST00000183644 150 ntBASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm9555-201ENSMUST00000200908 583 ntBASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm19187-201ENSMUST00000206781 892 ntBASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms