Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm7774-201ENSMUST00000200064 533 ntBASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Chchd1-203ENSMUST00000224633 557 ntBASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Mir449b-201ENSMUST00000104833 80 ntBASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm15460-201ENSMUST00000118147 391 ntBASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm6415-201ENSMUST00000118488 348 ntBASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm2756-201ENSMUST00000195851 400 ntBASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm5312-201ENSMUST00000203728 547 ntBASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm5779-201ENSMUST00000218467 910 ntBASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf220Q6PDX6 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Gm11594-201ENSMUST00000122313 162 ntBASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Gm25144-201ENSMUST00000179561 110 ntBASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Gm25352-201ENSMUST00000179815 110 ntBASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Gm21470-201ENSMUST00000187680 696 ntBASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf220Q6PDX6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms