Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Matn2-203ENSMUST00000226766 3252 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Gm12341-201ENSMUST00000119724 503 ntBASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Gm27437-201ENSMUST00000183429 107 ntBASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Itm2b-204ENSMUST00000228637 783 ntBASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Smarcd3Q6P9Z1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Gm28631-201ENSMUST00000190740 334 ntBASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Gm6218-201ENSMUST00000219812 628 ntBASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.73□□□□□ -0.53
Smarcd3Q6P9Z1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.72□□□□□ -0.53
Smarcd3Q6P9Z1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms