Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Casc4Q6P2L7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.98□□□□□ -0.33
Casc4Q6P2L7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Gm13226-201ENSMUST00000117838 404 ntBASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Casc4Q6P2L7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Mir686-201ENSMUST00000102174 109 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Gm14660-201ENSMUST00000119809 575 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Gm7029-201ENSMUST00000173226 450 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Gm27682-201ENSMUST00000183930 110 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Casc4Q6P2L7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Casc4Q6P2L7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms