Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ctr9Q62018 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ctr9Q62018 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ctr9Q62018 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm13342-201ENSMUST00000121055 207 ntBASIC15.11■□□□□ 0.01
Ctr9Q62018 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm45865-201ENSMUST00000211815 945 ntBASIC15.11■□□□□ 0.01
Ctr9Q62018 Cts7-204ENSMUST00000225321 1257 ntBASIC15.11■□□□□ 0.01
Ctr9Q62018 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.11■□□□□ 0.01
Ctr9Q62018 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ctr9Q62018 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ctr9Q62018 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ctr9Q62018 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.1■□□□□ 0.01
Ctr9Q62018 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.1■□□□□ 0.01
Ctr9Q62018 Gm12241-201ENSMUST00000118330 726 ntBASIC15.1■□□□□ 0.01
Ctr9Q62018 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.1■□□□□ 0.01
Ctr9Q62018 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.1■□□□□ 0.01
Ctr9Q62018 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.1■□□□□ 0.01
Ctr9Q62018 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.1■□□□□ 0.01
Ctr9Q62018 Gm43822-201ENSMUST00000200285 476 ntBASIC15.1■□□□□ 0.01
Ctr9Q62018 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ctr9Q62018 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.1■□□□□ 0.01
Ctr9Q62018 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.1■□□□□ 0.01
Ctr9Q62018 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.1■□□□□ 0.01
Ctr9Q62018 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.1■□□□□ 0.01
Ctr9Q62018 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ctr9Q62018 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.1■□□□□ 0.01
Ctr9Q62018 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ctr9Q62018 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.09■□□□□ 0.01
Ctr9Q62018 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms