Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12616-201ENSMUST00000118594 382 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm23699-201ENSMUST00000158835 135 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm5616-201ENSMUST00000165252 384 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm8741-201ENSMUST00000174736 384 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12624-201ENSMUST00000177615 382 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12621-201ENSMUST00000177760 382 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12615-201ENSMUST00000177970 382 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12622-201ENSMUST00000177975 382 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12627-201ENSMUST00000178412 382 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12625-201ENSMUST00000179122 382 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12614-201ENSMUST00000179586 382 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm12613-201ENSMUST00000180323 382 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Ecm1Q61508 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.09□□□□□ -0.15
Ecm1Q61508 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.09□□□□□ -0.15
Ecm1Q61508 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.09□□□□□ -0.15
Ecm1Q61508 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ecm1Q61508 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ecm1Q61508 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Ecm1Q61508 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.08□□□□□ -0.15
Ecm1Q61508 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ecm1Q61508 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ecm1Q61508 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Gm13611-201ENSMUST00000118269 318 ntBASIC14.08□□□□□ -0.16
Ecm1Q61508 Gm15711-201ENSMUST00000118889 535 ntBASIC14.08□□□□□ -0.16
Ecm1Q61508 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.08□□□□□ -0.16
Ecm1Q61508 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.08□□□□□ -0.16
Ecm1Q61508 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Gm18304-201ENSMUST00000189162 546 ntBASIC14.08□□□□□ -0.16
Ecm1Q61508 Gm19994-201ENSMUST00000217086 586 ntBASIC14.08□□□□□ -0.16
Ecm1Q61508 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ecm1Q61508 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ecm1Q61508 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ecm1Q61508 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ecm1Q61508 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.08□□□□□ -0.16
Ecm1Q61508 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms