Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Ift88Q61371 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ift88Q61371 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Ift88Q61371 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.15□□□□□ -0.14
Ift88Q61371 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ift88Q61371 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ift88Q61371 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Pck2-205ENSMUST00000226352 2784 ntBASIC14.15□□□□□ -0.14
Ift88Q61371 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.15□□□□□ -0.14
Ift88Q61371 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ift88Q61371 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.15□□□□□ -0.14
Ift88Q61371 Gm28693-202ENSMUST00000190758 331 ntBASIC14.15□□□□□ -0.14
Ift88Q61371 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.15□□□□□ -0.14
Ift88Q61371 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ift88Q61371 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ift88Q61371 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.15□□□□□ -0.14
Ift88Q61371 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ift88Q61371 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.14□□□□□ -0.15
Ift88Q61371 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ift88Q61371 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ift88Q61371 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ift88Q61371 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ift88Q61371 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.14□□□□□ -0.15
Ift88Q61371 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.14□□□□□ -0.15
Ift88Q61371 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
Ift88Q61371 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Mir6392-201ENSMUST00000184924 108 ntBASIC14.14□□□□□ -0.15
Ift88Q61371 Gm37917-201ENSMUST00000194711 392 ntBASIC14.14□□□□□ -0.15
Ift88Q61371 Gm18624-201ENSMUST00000220966 658 ntBASIC14.14□□□□□ -0.15
Ift88Q61371 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.14□□□□□ -0.15
Ift88Q61371 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ift88Q61371 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.14□□□□□ -0.15
Ift88Q61371 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.14□□□□□ -0.15
Ift88Q61371 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ift88Q61371 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ift88Q61371 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.14□□□□□ -0.15
Ift88Q61371 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ift88Q61371 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.14□□□□□ -0.15
Ift88Q61371 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.13□□□□□ -0.15
Ift88Q61371 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.13□□□□□ -0.15
Ift88Q61371 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.13□□□□□ -0.15
Ift88Q61371 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.13□□□□□ -0.15
Ift88Q61371 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.13□□□□□ -0.15
Ift88Q61371 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.13□□□□□ -0.15
Ift88Q61371 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ift88Q61371 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ift88Q61371 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms