Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Gm22614-201ENSMUST00000178300 165 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Gm3890-201ENSMUST00000182416 207 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.72□□□□□ -0.37
Sim1Q61045 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Gm19931-201ENSMUST00000198920 368 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.72□□□□□ -0.37
Sim1Q61045 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.72□□□□□ -0.37
Sim1Q61045 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.72□□□□□ -0.37
Sim1Q61045 Gm18212-201ENSMUST00000211678 889 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.72□□□□□ -0.37
Sim1Q61045 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Gm22042-201ENSMUST00000082989 165 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Gm26232-201ENSMUST00000083360 166 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Gm24136-201ENSMUST00000083374 165 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Gm26110-201ENSMUST00000083971 165 ntBASIC12.72□□□□□ -0.37
Sim1Q61045 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.72□□□□□ -0.37
Sim1Q61045 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sim1Q61045 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.72□□□□□ -0.37
Sim1Q61045 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.72□□□□□ -0.37
Sim1Q61045 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sim1Q61045 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sim1Q61045 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.71□□□□□ -0.37
Sim1Q61045 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.71□□□□□ -0.37
Sim1Q61045 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Sim1Q61045 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Sim1Q61045 Gm14277-201ENSMUST00000121195 360 ntBASIC12.71□□□□□ -0.37
Sim1Q61045 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.71□□□□□ -0.37
Sim1Q61045 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.71□□□□□ -0.37
Sim1Q61045 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.71□□□□□ -0.37
Sim1Q61045 Gm18041-201ENSMUST00000218210 618 ntBASIC12.71□□□□□ -0.37
Sim1Q61045 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.71□□□□□ -0.37
Sim1Q61045 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sim1Q61045 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.71□□□□□ -0.37
Sim1Q61045 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sim1Q61045 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sim1Q61045 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sim1Q61045 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sim1Q61045 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Sim1Q61045 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sim1Q61045 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sim1Q61045 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sim1Q61045 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.7□□□□□ -0.38
Sim1Q61045 Gm22334-201ENSMUST00000158070 133 ntBASIC12.7□□□□□ -0.38
Sim1Q61045 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.7□□□□□ -0.38
Sim1Q61045 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.7□□□□□ -0.38
Sim1Q61045 Gm45186-201ENSMUST00000206874 478 ntBASIC12.7□□□□□ -0.38
Sim1Q61045 Gm6458-201ENSMUST00000211573 635 ntBASIC12.7□□□□□ -0.38
Sim1Q61045 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.7□□□□□ -0.38
Sim1Q61045 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sim1Q61045 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sim1Q61045 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms