Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Gm14726-201ENSMUST00000120623 896 ntBASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Gm8099-201ENSMUST00000200510 742 ntBASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shroom1Q5SX79 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm17376-201ENSMUST00000166016 84 ntBASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Shroom1Q5SX79 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.6□□□□□ -0.23
Shroom1Q5SX79 Gm6082-201ENSMUST00000215204 454 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms