Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Gm13492-201ENSMUST00000119772 665 ntBASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Gm13297-201ENSMUST00000120205 934 ntBASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Gm5904-201ENSMUST00000210286 865 ntBASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Cts7-204ENSMUST00000225321 1257 ntBASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps54Q5SPW0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps54Q5SPW0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps54Q5SPW0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps54Q5SPW0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.33■□□□□ 0.05
Vps54Q5SPW0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps54Q5SPW0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps54Q5SPW0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Vps54Q5SPW0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps54Q5SPW0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm14723-201ENSMUST00000118686 215 ntBASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm13875-201ENSMUST00000120162 282 ntBASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm11964-201ENSMUST00000120982 444 ntBASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps54Q5SPW0 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Gm4986-201ENSMUST00000119731 549 ntBASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Gm37489-201ENSMUST00000191883 159 ntBASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Gm6621-201ENSMUST00000193251 772 ntBASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Gm9368-201ENSMUST00000219348 831 ntBASIC15.32■□□□□ 0.04
Vps54Q5SPW0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms