Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Gm13369-201ENSMUST00000119442 987 ntBASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Gm9002-201ENSMUST00000178437 499 ntBASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Gm7067-201ENSMUST00000207698 1249 ntBASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Gm17794-201ENSMUST00000220252 955 ntBASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 AC110817.1-201ENSMUST00000225706 605 ntBASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Gm12203-201ENSMUST00000118235 598 ntBASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Gm12209-201ENSMUST00000120089 596 ntBASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Gm15806-201ENSMUST00000120696 955 ntBASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Gm8652-201ENSMUST00000181363 964 ntBASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav5d-4Q5R1F6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms