Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf20Q5DTM8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Gm23363-201ENSMUST00000175024 79 ntBASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf20Q5DTM8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Gm4768-201ENSMUST00000206199 686 ntBASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.24■□□□□ 0.03
Rnf20Q5DTM8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Gm19163-201ENSMUST00000223313 780 ntBASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf20Q5DTM8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf20Q5DTM8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms