Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim80Q3V061 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim80Q3V061 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim80Q3V061 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim80Q3V061 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trim80Q3V061 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim80Q3V061 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim80Q3V061 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim80Q3V061 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim80Q3V061 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.27□□□□□ -0.29
Trim80Q3V061 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim80Q3V061 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim80Q3V061 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim80Q3V061 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim80Q3V061 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim80Q3V061 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trim80Q3V061 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trim80Q3V061 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trim80Q3V061 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim80Q3V061 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.26□□□□□ -0.29
Trim80Q3V061 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.26□□□□□ -0.29
Trim80Q3V061 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Gm8927-201ENSMUST00000181978 981 ntBASIC13.26□□□□□ -0.29
Trim80Q3V061 AY702102-202ENSMUST00000194651 1173 ntBASIC13.26□□□□□ -0.29
Trim80Q3V061 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.26□□□□□ -0.29
Trim80Q3V061 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Gm3222-201ENSMUST00000071282 990 ntBASIC13.26□□□□□ -0.29
Trim80Q3V061 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.26□□□□□ -0.29
Trim80Q3V061 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim80Q3V061 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim80Q3V061 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Gm5425-201ENSMUST00000214125 459 ntBASIC13.25□□□□□ -0.29
Trim80Q3V061 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.25□□□□□ -0.29
Trim80Q3V061 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.25□□□□□ -0.29
Trim80Q3V061 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trim80Q3V061 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim80Q3V061 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms