Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nhlrc4Q3UP44 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nhlrc4Q3UP44 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nhlrc4Q3UP44 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Nhlrc4Q3UP44 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm16379-201ENSMUST00000161469 348 ntBASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm8762-201ENSMUST00000193486 339 ntBASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nhlrc4Q3UP44 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Gm15703-201ENSMUST00000120250 880 ntBASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Gm11964-201ENSMUST00000120982 444 ntBASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Gm8062-201ENSMUST00000139696 444 ntBASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Gm19184-201ENSMUST00000196798 928 ntBASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Gm19309-201ENSMUST00000218295 205 ntBASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Daam2-202ENSMUST00000224595 1926 ntBASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nhlrc4Q3UP44 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nhlrc4Q3UP44 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.73□□□□□ -0.53
Nhlrc4Q3UP44 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nhlrc4Q3UP44 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms