Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nlrc4Q3UP24 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Gm12502-201ENSMUST00000120197 444 ntBASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nlrc4Q3UP24 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Gm24548-201ENSMUST00000158650 108 ntBASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Gm5781-201ENSMUST00000219792 443 ntBASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nlrc4Q3UP24 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Gm9899-201ENSMUST00000065519 555 ntBASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nlrc4Q3UP24 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms