Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Gm12490-201ENSMUST00000120255 560 ntBASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Gm26185-201ENSMUST00000157692 266 ntBASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Gm27486-201ENSMUST00000184923 80 ntBASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Gm11814-201ENSMUST00000119515 929 ntBASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Gm16479-201ENSMUST00000121706 932 ntBASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.06□□□□□ -0.48
Brf2Q3UAW9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.06□□□□□ -0.48
Brf2Q3UAW9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Brf2Q3UAW9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm13369-201ENSMUST00000119442 987 ntBASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm14704-201ENSMUST00000120300 874 ntBASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm11637-201ENSMUST00000120601 592 ntBASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm2231-201ENSMUST00000125661 612 ntBASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms