Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm13039-201ENSMUST00000118638 794 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm26272-201ENSMUST00000179241 132 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm42655-201ENSMUST00000202782 1134 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm5178-201ENSMUST00000219380 898 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm25562-201ENSMUST00000104608 133 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 CT025689.1-201ENSMUST00000225214 283 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm16425-201ENSMUST00000118143 3130 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm25735-201ENSMUST00000175164 215 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm26931-201ENSMUST00000182273 609 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm7833-201ENSMUST00000183288 990 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm28686-201ENSMUST00000187404 609 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm36980-201ENSMUST00000195643 622 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm44315-201ENSMUST00000203041 219 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 AC153152.3-201ENSMUST00000222188 1135 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gm11473-201ENSMUST00000118980 359 ntBASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Mir3100-201ENSMUST00000174918 65 ntBASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gm6859-201ENSMUST00000218614 989 ntBASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC6.54□□□□□ -1.36
Ush2AQ2QI47 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gm25569-201ENSMUST00000157175 131 ntBASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gm8459-201ENSMUST00000162504 760 ntBASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gm25872-201ENSMUST00000177784 100 ntBASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gm27440-201ENSMUST00000184785 107 ntBASIC6.54□□□□□ -1.36
Ush2AQ2QI47 BB187690-201ENSMUST00000198619 1176 ntBASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ush2AQ2QI47 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms