Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.38□□□□□ -0.59
Chd8Q09XV5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Gm37782-201ENSMUST00000194879 678 ntBASIC11.38□□□□□ -0.59
Chd8Q09XV5 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Gm45085-201ENSMUST00000209100 441 ntBASIC11.38□□□□□ -0.59
Chd8Q09XV5 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Chd8Q09XV5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.37□□□□□ -0.59
Chd8Q09XV5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Gm13263-201ENSMUST00000121271 838 ntBASIC11.37□□□□□ -0.59
Chd8Q09XV5 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Gm8342-201ENSMUST00000209839 757 ntBASIC11.37□□□□□ -0.59
Chd8Q09XV5 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.37□□□□□ -0.59
Chd8Q09XV5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.37□□□□□ -0.59
Chd8Q09XV5 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Chd8Q09XV5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm14704-201ENSMUST00000120300 874 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm13445-201ENSMUST00000121664 307 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm9081-201ENSMUST00000182346 991 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm9022-201ENSMUST00000182482 992 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm43184-201ENSMUST00000197247 542 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm43726-201ENSMUST00000199110 775 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gm5507-201ENSMUST00000091897 1008 ntBASIC11.36□□□□□ -0.59
Chd8Q09XV5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd8Q09XV5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd8Q09XV5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms