Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC19.21■□□□□ 0.67
Col17a1Q07563 Gm10443-201ENSMUST00000119024 210 ntBASIC19.21■□□□□ 0.67
Col17a1Q07563 Gm15004-201ENSMUST00000119192 630 ntBASIC19.21■□□□□ 0.67
Col17a1Q07563 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC19.21■□□□□ 0.67
Col17a1Q07563 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC19.21■□□□□ 0.67
Col17a1Q07563 Gm33707-201ENSMUST00000195135 569 ntBASIC19.21■□□□□ 0.67
Col17a1Q07563 Gm20568-201ENSMUST00000197129 208 ntBASIC19.21■□□□□ 0.67
Col17a1Q07563 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC19.21■□□□□ 0.67
Col17a1Q07563 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC19.21■□□□□ 0.67
Col17a1Q07563 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col17a1Q07563 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.21■□□□□ 0.67
Col17a1Q07563 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col17a1Q07563 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Col17a1Q07563 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col17a1Q07563 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC19.2■□□□□ 0.66
Col17a1Q07563 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC19.2■□□□□ 0.66
Col17a1Q07563 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col17a1Q07563 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col17a1Q07563 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Col17a1Q07563 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col17a1Q07563 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Col17a1Q07563 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col17a1Q07563 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col17a1Q07563 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col17a1Q07563 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col17a1Q07563 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC19.2■□□□□ 0.66
Col17a1Q07563 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC19.2■□□□□ 0.66
Col17a1Q07563 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC19.2■□□□□ 0.66
Col17a1Q07563 Gm5650-201ENSMUST00000209641 598 ntBASIC19.2■□□□□ 0.66
Col17a1Q07563 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Col17a1Q07563 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col17a1Q07563 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col17a1Q07563 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC19.19■□□□□ 0.66
Col17a1Q07563 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC19.19■□□□□ 0.66
Col17a1Q07563 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Gm23062-201ENSMUST00000102349 110 ntBASIC19.19■□□□□ 0.66
Col17a1Q07563 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Gm12470-201ENSMUST00000117239 1049 ntBASIC19.19■□□□□ 0.66
Col17a1Q07563 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC19.19■□□□□ 0.66
Col17a1Q07563 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC19.19■□□□□ 0.66
Col17a1Q07563 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Col17a1Q07563 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC19.19■□□□□ 0.66
Col17a1Q07563 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col17a1Q07563 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC19.19■□□□□ 0.66
Col17a1Q07563 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.18■□□□□ 0.66
Col17a1Q07563 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC19.18■□□□□ 0.66
Col17a1Q07563 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Col17a1Q07563 Gm37638-201ENSMUST00000194337 1123 ntBASIC19.18■□□□□ 0.66
Col17a1Q07563 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC19.18■□□□□ 0.66
Col17a1Q07563 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Gm9791-201ENSMUST00000060997 447 ntBASIC19.18■□□□□ 0.66
Col17a1Q07563 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Col17a1Q07563 AC154671.1-201ENSMUST00000228617 1578 ntBASIC19.18■□□□□ 0.66
Col17a1Q07563 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 AC166836.1-201ENSMUST00000219933 1795 ntBASIC19.18■□□□□ 0.66
Col17a1Q07563 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Col17a1Q07563 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Col17a1Q07563 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col17a1Q07563 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col17a1Q07563 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC19.17■□□□□ 0.66
Col17a1Q07563 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col17a1Q07563 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col17a1Q07563 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Col17a1Q07563 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col17a1Q07563 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col17a1Q07563 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col17a1Q07563 Gm18294-201ENSMUST00000176980 1748 ntBASIC19.17■□□□□ 0.66
Col17a1Q07563 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col17a1Q07563 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col17a1Q07563 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC19.17■□□□□ 0.66
Col17a1Q07563 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col17a1Q07563 Gm12736-201ENSMUST00000119330 236 ntBASIC19.17■□□□□ 0.66
Col17a1Q07563 Gm15703-201ENSMUST00000120250 880 ntBASIC19.17■□□□□ 0.66
Col17a1Q07563 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC19.17■□□□□ 0.66
Col17a1Q07563 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col17a1Q07563 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms