Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col10a1Q05306 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col10a1Q05306 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col10a1Q05306 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Col10a1Q05306 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.82□□□□□ -0.52
Col10a1Q05306 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.82□□□□□ -0.52
Col10a1Q05306 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm12291-201ENSMUST00000121627 311 ntBASIC11.82□□□□□ -0.52
Col10a1Q05306 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.82□□□□□ -0.52
Col10a1Q05306 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm22121-201ENSMUST00000175148 54 ntBASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.82□□□□□ -0.52
Col10a1Q05306 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col10a1Q05306 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col10a1Q05306 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col10a1Q05306 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col10a1Q05306 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col10a1Q05306 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col10a1Q05306 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.81□□□□□ -0.52
Col10a1Q05306 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col10a1Q05306 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.81□□□□□ -0.52
Col10a1Q05306 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.81□□□□□ -0.52
Col10a1Q05306 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.81□□□□□ -0.52
Col10a1Q05306 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col10a1Q05306 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Col10a1Q05306 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col10a1Q05306 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col10a1Q05306 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col10a1Q05306 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col10a1Q05306 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms