Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Xrn1P97789 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC17.77■□□□□ 0.44
Xrn1P97789 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC17.77■□□□□ 0.44
Xrn1P97789 Gm18711-201ENSMUST00000199341 750 ntBASIC17.77■□□□□ 0.44
Xrn1P97789 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC17.77■□□□□ 0.44
Xrn1P97789 AC169036.1-201ENSMUST00000227994 296 ntBASIC17.77■□□□□ 0.44
Xrn1P97789 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Xrn1P97789 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Mirlet7i-201ENSMUST00000083472 85 ntBASIC17.77■□□□□ 0.44
Xrn1P97789 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Xrn1P97789 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Xrn1P97789 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Xrn1P97789 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.77■□□□□ 0.43
Xrn1P97789 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Xrn1P97789 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Xrn1P97789 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Xrn1P97789 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Xrn1P97789 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Xrn1P97789 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Xrn1P97789 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Xrn1P97789 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC17.76■□□□□ 0.43
Xrn1P97789 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC17.76■□□□□ 0.43
Xrn1P97789 Gm11836-201ENSMUST00000121022 441 ntBASIC17.76■□□□□ 0.43
Xrn1P97789 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC17.76■□□□□ 0.43
Xrn1P97789 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC17.76■□□□□ 0.43
Xrn1P97789 Gm25072-201ENSMUST00000175233 235 ntBASIC17.76■□□□□ 0.43
Xrn1P97789 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Gm9358-201ENSMUST00000183067 927 ntBASIC17.76■□□□□ 0.43
Xrn1P97789 Gm3028-201ENSMUST00000213805 1119 ntBASIC17.76■□□□□ 0.43
Xrn1P97789 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Xrn1P97789 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.76■□□□□ 0.43
Xrn1P97789 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC17.76■□□□□ 0.43
Xrn1P97789 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xrn1P97789 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC17.76■□□□□ 0.43
Xrn1P97789 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Xrn1P97789 Gm12419-201ENSMUST00000116649 636 ntBASIC17.75■□□□□ 0.43
Xrn1P97789 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC17.75■□□□□ 0.43
Xrn1P97789 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Gm29499-201ENSMUST00000189151 486 ntBASIC17.75■□□□□ 0.43
Xrn1P97789 Gm28329-201ENSMUST00000191208 689 ntBASIC17.75■□□□□ 0.43
Xrn1P97789 Gm29171-201ENSMUST00000191397 486 ntBASIC17.75■□□□□ 0.43
Xrn1P97789 Gm44711-201ENSMUST00000205414 1264 ntBASIC17.75■□□□□ 0.43
Xrn1P97789 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Gm43677-201ENSMUST00000198098 2378 ntBASIC17.75■□□□□ 0.43
Xrn1P97789 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Gm43267-201ENSMUST00000199664 1796 ntBASIC17.75■□□□□ 0.43
Xrn1P97789 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Xrn1P97789 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC17.75■□□□□ 0.43
Xrn1P97789 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC17.75■□□□□ 0.43
Xrn1P97789 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC17.75■□□□□ 0.43
Xrn1P97789 Gm8815-201ENSMUST00000173809 620 ntBASIC17.75■□□□□ 0.43
Xrn1P97789 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC17.75■□□□□ 0.43
Xrn1P97789 Gm6867-201ENSMUST00000219165 425 ntBASIC17.75■□□□□ 0.43
Xrn1P97789 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrn1P97789 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrn1P97789 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Xrn1P97789 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Xrn1P97789 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrn1P97789 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrn1P97789 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.74■□□□□ 0.43
Xrn1P97789 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.74■□□□□ 0.43
Xrn1P97789 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC17.74■□□□□ 0.43
Xrn1P97789 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Xrn1P97789 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrn1P97789 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC17.74■□□□□ 0.43
Xrn1P97789 Gm13328-201ENSMUST00000120816 1020 ntBASIC17.74■□□□□ 0.43
Xrn1P97789 Gm24844-201ENSMUST00000158679 127 ntBASIC17.74■□□□□ 0.43
Xrn1P97789 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Xrn1P97789 Gm23153-201ENSMUST00000175323 313 ntBASIC17.74■□□□□ 0.43
Xrn1P97789 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Xrn1P97789 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrn1P97789 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms