Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.13□□□□□ -0.47
Nkx3-2P97503 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.12□□□□□ -0.47
Nkx3-2P97503 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.12□□□□□ -0.47
Nkx3-2P97503 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm26185-201ENSMUST00000157692 266 ntBASIC12.12□□□□□ -0.47
Nkx3-2P97503 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm38266-201ENSMUST00000194931 421 ntBASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Gm9823-201ENSMUST00000051212 327 ntBASIC12.12□□□□□ -0.47
Nkx3-2P97503 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.12□□□□□ -0.47
Nkx3-2P97503 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.12□□□□□ -0.47
Nkx3-2P97503 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.12□□□□□ -0.47
Nkx3-2P97503 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.12□□□□□ -0.47
Nkx3-2P97503 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx3-2P97503 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx3-2P97503 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.11□□□□□ -0.47
Nkx3-2P97503 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.11□□□□□ -0.47
Nkx3-2P97503 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx3-2P97503 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms