Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
H3f3aP84244 Gm25261-201ENSMUST00000157416 134 ntBASIC11.41□□□□□ -0.58
H3f3aP84244 Gm23363-201ENSMUST00000175024 79 ntBASIC11.41□□□□□ -0.58
H3f3aP84244 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.41□□□□□ -0.58
H3f3aP84244 AY702102-202ENSMUST00000194651 1173 ntBASIC11.41□□□□□ -0.58
H3f3aP84244 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.41□□□□□ -0.58
H3f3aP84244 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
H3f3aP84244 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
H3f3aP84244 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.41□□□□□ -0.58
H3f3aP84244 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.41□□□□□ -0.58
H3f3aP84244 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.41□□□□□ -0.58
H3f3aP84244 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3aP84244 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.41□□□□□ -0.58
H3f3aP84244 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
H3f3aP84244 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.4□□□□□ -0.58
H3f3aP84244 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.4□□□□□ -0.58
H3f3aP84244 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
H3f3aP84244 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.4□□□□□ -0.58
H3f3aP84244 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
H3f3aP84244 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H3f3aP84244 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.4□□□□□ -0.58
H3f3aP84244 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.4□□□□□ -0.58
H3f3aP84244 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.4□□□□□ -0.58
H3f3aP84244 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.4□□□□□ -0.58
H3f3aP84244 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.4□□□□□ -0.58
H3f3aP84244 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
H3f3aP84244 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.4□□□□□ -0.58
H3f3aP84244 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.4□□□□□ -0.58
H3f3aP84244 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3aP84244 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H3f3aP84244 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
H3f3aP84244 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H3f3aP84244 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
H3f3aP84244 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H3f3aP84244 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H3f3aP84244 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.39□□□□□ -0.59
H3f3aP84244 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.39□□□□□ -0.59
H3f3aP84244 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H3f3aP84244 Gm14127-201ENSMUST00000117906 678 ntBASIC11.39□□□□□ -0.59
H3f3aP84244 Gm11591-201ENSMUST00000120063 702 ntBASIC11.39□□□□□ -0.59
H3f3aP84244 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.39□□□□□ -0.59
H3f3aP84244 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms