Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.74□□□□□ -0.69
SgcaP82350 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.74□□□□□ -0.69
SgcaP82350 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.73□□□□□ -0.69
SgcaP82350 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.73□□□□□ -0.69
SgcaP82350 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Gm8410-201ENSMUST00000117225 605 ntBASIC10.73□□□□□ -0.69
SgcaP82350 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.73□□□□□ -0.69
SgcaP82350 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Mir6990-201ENSMUST00000183724 91 ntBASIC10.73□□□□□ -0.69
SgcaP82350 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Gm17330-201ENSMUST00000221047 165 ntBASIC10.73□□□□□ -0.69
SgcaP82350 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.73□□□□□ -0.69
SgcaP82350 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SgcaP82350 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.73□□□□□ -0.69
SgcaP82350 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
SgcaP82350 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcaP82350 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcaP82350 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.72□□□□□ -0.69
SgcaP82350 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
SgcaP82350 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Gm12585-201ENSMUST00000117307 290 ntBASIC10.72□□□□□ -0.69
SgcaP82350 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.72□□□□□ -0.69
SgcaP82350 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Gm24158-201ENSMUST00000175263 71 ntBASIC10.72□□□□□ -0.69
SgcaP82350 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SgcaP82350 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcaP82350 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
SgcaP82350 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.72□□□□□ -0.69
SgcaP82350 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SgcaP82350 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms