Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm13829-201ENSMUST00000119600 138 ntBASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.69□□□□□ -0.7
Pdlim4P70271 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm27331-201ENSMUST00000183705 60 ntBASIC10.69□□□□□ -0.7
Pdlim4P70271 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm6266-201ENSMUST00000203844 806 ntBASIC10.69□□□□□ -0.7
Pdlim4P70271 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.69□□□□□ -0.7
Pdlim4P70271 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.69□□□□□ -0.7
Pdlim4P70271 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.69□□□□□ -0.7
Pdlim4P70271 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pdlim4P70271 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.68□□□□□ -0.7
Pdlim4P70271 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pdlim4P70271 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.68□□□□□ -0.7
Pdlim4P70271 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Gm8805-201ENSMUST00000117848 313 ntBASIC10.68□□□□□ -0.7
Pdlim4P70271 Gm13123-201ENSMUST00000122173 492 ntBASIC10.68□□□□□ -0.7
Pdlim4P70271 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.68□□□□□ -0.7
Pdlim4P70271 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.68□□□□□ -0.7
Pdlim4P70271 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.68□□□□□ -0.7
Pdlim4P70271 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Gm37497-201ENSMUST00000195830 798 ntBASIC10.68□□□□□ -0.7
Pdlim4P70271 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.68□□□□□ -0.7
Pdlim4P70271 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Pdlim4P70271 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.68□□□□□ -0.7
Pdlim4P70271 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pdlim4P70271 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim4P70271 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms