Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.12□□□□□ -0.95
Rpl39P62892 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39P62892 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39P62892 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39P62892 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39P62892 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Rpl39P62892 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Rpl39P62892 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Rpl39P62892 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Rpl39P62892 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Rpl39P62892 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.11□□□□□ -0.95
Rpl39P62892 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Gm27525-201ENSMUST00000184465 107 ntBASIC9.11□□□□□ -0.95
Rpl39P62892 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.11□□□□□ -0.95
Rpl39P62892 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.11□□□□□ -0.95
Rpl39P62892 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.11□□□□□ -0.95
Rpl39P62892 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.11□□□□□ -0.95
Rpl39P62892 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.11□□□□□ -0.95
Rpl39P62892 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rpl39P62892 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.11□□□□□ -0.95
Rpl39P62892 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Rpl39P62892 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Rpl39P62892 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Rpl39P62892 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Rpl39P62892 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.1□□□□□ -0.95
Rpl39P62892 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.1□□□□□ -0.95
Rpl39P62892 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.1□□□□□ -0.95
Rpl39P62892 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.1□□□□□ -0.95
Rpl39P62892 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rpl39P62892 Gm44124-201ENSMUST00000204159 472 ntBASIC9.1□□□□□ -0.95
Rpl39P62892 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms