Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.3□□□□□ -0.6
Sec61a1P61620 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.3□□□□□ -0.6
Sec61a1P61620 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.3□□□□□ -0.6
Sec61a1P61620 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Gm12485-201ENSMUST00000119641 291 ntBASIC11.3□□□□□ -0.6
Sec61a1P61620 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.3□□□□□ -0.6
Sec61a1P61620 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Gm27772-201ENSMUST00000184900 187 ntBASIC11.3□□□□□ -0.6
Sec61a1P61620 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.3□□□□□ -0.6
Sec61a1P61620 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.3□□□□□ -0.6
Sec61a1P61620 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.3□□□□□ -0.6
Sec61a1P61620 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a1P61620 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sec61a1P61620 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Sec61a1P61620 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sec61a1P61620 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sec61a1P61620 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.29□□□□□ -0.6
Sec61a1P61620 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Gm15770-201ENSMUST00000117498 584 ntBASIC11.29□□□□□ -0.6
Sec61a1P61620 Gm13689-201ENSMUST00000119360 685 ntBASIC11.29□□□□□ -0.6
Sec61a1P61620 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.29□□□□□ -0.6
Sec61a1P61620 Gm8602-201ENSMUST00000184045 607 ntBASIC11.29□□□□□ -0.6
Sec61a1P61620 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.29□□□□□ -0.6
Sec61a1P61620 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sec61a1P61620 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.29□□□□□ -0.6
Sec61a1P61620 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Sec61a1P61620 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a1P61620 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms