Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.35□□□□□ -0.75
Sssca1P56873 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sssca1P56873 Gm38223-201ENSMUST00000194484 695 ntBASIC10.35□□□□□ -0.75
Sssca1P56873 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.35□□□□□ -0.75
Sssca1P56873 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sssca1P56873 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sssca1P56873 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.34□□□□□ -0.75
Sssca1P56873 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
Sssca1P56873 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Sssca1P56873 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.34□□□□□ -0.75
Sssca1P56873 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.34□□□□□ -0.75
Sssca1P56873 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.34□□□□□ -0.75
Sssca1P56873 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.34□□□□□ -0.75
Sssca1P56873 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.34□□□□□ -0.75
Sssca1P56873 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.34□□□□□ -0.75
Sssca1P56873 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Gm27306-201ENSMUST00000183970 107 ntBASIC10.34□□□□□ -0.75
Sssca1P56873 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.34□□□□□ -0.75
Sssca1P56873 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.34□□□□□ -0.75
Sssca1P56873 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sssca1P56873 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.34□□□□□ -0.75
Sssca1P56873 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.34□□□□□ -0.75
Sssca1P56873 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sssca1P56873 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sssca1P56873 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.33□□□□□ -0.76
Sssca1P56873 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.33□□□□□ -0.76
Sssca1P56873 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sssca1P56873 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sssca1P56873 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sssca1P56873 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.33□□□□□ -0.76
Sssca1P56873 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Sssca1P56873 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.33□□□□□ -0.76
Sssca1P56873 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Gm27989-201ENSMUST00000184721 107 ntBASIC10.33□□□□□ -0.76
Sssca1P56873 Gm27838-201ENSMUST00000184829 128 ntBASIC10.33□□□□□ -0.76
Sssca1P56873 Gm28760-201ENSMUST00000185995 736 ntBASIC10.33□□□□□ -0.76
Sssca1P56873 Gm29667-201ENSMUST00000190817 490 ntBASIC10.33□□□□□ -0.76
Sssca1P56873 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sssca1P56873 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Sssca1P56873 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sssca1P56873 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.33□□□□□ -0.76
Sssca1P56873 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sssca1P56873 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sssca1P56873 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms