Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.8□□□□□ -0.36
Lim2P56563 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.8□□□□□ -0.36
Lim2P56563 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lim2P56563 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.8□□□□□ -0.36
Lim2P56563 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lim2P56563 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.8□□□□□ -0.36
Lim2P56563 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lim2P56563 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.8□□□□□ -0.36
Lim2P56563 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.8□□□□□ -0.36
Lim2P56563 Gm13392-201ENSMUST00000117708 150 ntBASIC12.8□□□□□ -0.36
Lim2P56563 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Lim2P56563 Gm25261-201ENSMUST00000157416 134 ntBASIC12.8□□□□□ -0.36
Lim2P56563 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.8□□□□□ -0.36
Lim2P56563 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.8□□□□□ -0.36
Lim2P56563 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Lim2P56563 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lim2P56563 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lim2P56563 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Lim2P56563 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lim2P56563 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lim2P56563 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.8□□□□□ -0.36
Lim2P56563 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lim2P56563 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lim2P56563 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.79□□□□□ -0.36
Lim2P56563 Gm14704-201ENSMUST00000120300 874 ntBASIC12.79□□□□□ -0.36
Lim2P56563 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.79□□□□□ -0.36
Lim2P56563 Gm22121-201ENSMUST00000175148 54 ntBASIC12.79□□□□□ -0.36
Lim2P56563 Gm37008-201ENSMUST00000195712 319 ntBASIC12.79□□□□□ -0.36
Lim2P56563 Gm43630-201ENSMUST00000201550 776 ntBASIC12.79□□□□□ -0.36
Lim2P56563 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.79□□□□□ -0.36
Lim2P56563 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.79□□□□□ -0.36
Lim2P56563 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.79□□□□□ -0.36
Lim2P56563 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lim2P56563 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lim2P56563 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Lim2P56563 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Lim2P56563 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.79□□□□□ -0.36
Lim2P56563 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lim2P56563 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lim2P56563 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lim2P56563 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lim2P56563 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lim2P56563 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.78□□□□□ -0.36
Lim2P56563 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lim2P56563 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lim2P56563 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lim2P56563 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms