Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rrp1P56183 Gm12859-201ENSMUST00000117834 427 ntBASIC14.43□□□□□ -0.1
Rrp1P56183 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.43□□□□□ -0.1
Rrp1P56183 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Gm6152-201ENSMUST00000151704 340 ntBASIC14.43□□□□□ -0.1
Rrp1P56183 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.43□□□□□ -0.1
Rrp1P56183 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Rrp1P56183 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.43□□□□□ -0.1
Rrp1P56183 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.43□□□□□ -0.1
Rrp1P56183 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.43□□□□□ -0.1
Rrp1P56183 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rrp1P56183 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.43□□□□□ -0.1
Rrp1P56183 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rrp1P56183 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Rrp1P56183 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rrp1P56183 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rrp1P56183 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rrp1P56183 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Gm15429-201ENSMUST00000151268 798 ntBASIC14.42□□□□□ -0.1
Rrp1P56183 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rrp1P56183 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.42□□□□□ -0.1
Rrp1P56183 Gm28631-201ENSMUST00000190740 334 ntBASIC14.42□□□□□ -0.1
Rrp1P56183 Gm19184-201ENSMUST00000196798 928 ntBASIC14.42□□□□□ -0.1
Rrp1P56183 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.42□□□□□ -0.1
Rrp1P56183 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Gm18473-201ENSMUST00000220543 868 ntBASIC14.42□□□□□ -0.1
Rrp1P56183 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rrp1P56183 Gm16372-201ENSMUST00000073088 450 ntBASIC14.42□□□□□ -0.1
Rrp1P56183 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.42□□□□□ -0.1
Rrp1P56183 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.42□□□□□ -0.1
Rrp1P56183 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rrp1P56183 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.42□□□□□ -0.1
Rrp1P56183 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rrp1P56183 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.41□□□□□ -0.1
Rrp1P56183 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.41□□□□□ -0.1
Rrp1P56183 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.41□□□□□ -0.1
Rrp1P56183 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.41□□□□□ -0.1
Rrp1P56183 Mir339-201ENSMUST00000083659 96 ntBASIC14.41□□□□□ -0.1
Rrp1P56183 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.41□□□□□ -0.1
Rrp1P56183 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rrp1P56183 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.41□□□□□ -0.1
Rrp1P56183 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.41□□□□□ -0.1
Rrp1P56183 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.41□□□□□ -0.1
Rrp1P56183 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rrp1P56183 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rrp1P56183 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.4□□□□□ -0.1
Rrp1P56183 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rrp1P56183 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.4□□□□□ -0.1
Rrp1P56183 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms