Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.29□□□□□ -0.44
Sox3P53784 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox3P53784 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox3P53784 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.29□□□□□ -0.44
Sox3P53784 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.29□□□□□ -0.44
Sox3P53784 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 Gm37922-201ENSMUST00000195596 455 ntBASIC12.29□□□□□ -0.44
Sox3P53784 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.29□□□□□ -0.44
Sox3P53784 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.29□□□□□ -0.44
Sox3P53784 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.29□□□□□ -0.44
Sox3P53784 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox3P53784 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox3P53784 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox3P53784 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sox3P53784 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Gm6023-201ENSMUST00000118217 606 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox3P53784 Gm12566-201ENSMUST00000121479 359 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Gm6222-202ENSMUST00000182143 629 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox3P53784 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sox3P53784 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Sox3P53784 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Sox3P53784 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.28□□□□□ -0.44
Sox3P53784 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sox3P53784 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox3P53784 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox3P53784 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox3P53784 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sox3P53784 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox3P53784 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox3P53784 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms