Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.38□□□□□ -0.43
Lbx1P52955 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.38□□□□□ -0.43
Lbx1P52955 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.38□□□□□ -0.43
Lbx1P52955 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.38□□□□□ -0.43
Lbx1P52955 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lbx1P52955 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Gm13492-201ENSMUST00000119772 665 ntBASIC12.38□□□□□ -0.43
Lbx1P52955 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.38□□□□□ -0.43
Lbx1P52955 Gm17831-201ENSMUST00000205579 900 ntBASIC12.38□□□□□ -0.43
Lbx1P52955 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.38□□□□□ -0.43
Lbx1P52955 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.38□□□□□ -0.43
Lbx1P52955 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lbx1P52955 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.38□□□□□ -0.43
Lbx1P52955 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.38□□□□□ -0.43
Lbx1P52955 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lbx1P52955 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lbx1P52955 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Lbx1P52955 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lbx1P52955 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Gm5616-201ENSMUST00000165252 384 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Gm8741-201ENSMUST00000174736 384 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Gm7985-201ENSMUST00000183329 981 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Gm28388-201ENSMUST00000186262 437 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Gm5733-201ENSMUST00000190232 939 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Gm45925-201ENSMUST00000218882 744 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lbx1P52955 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lbx1P52955 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Lbx1P52955 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lbx1P52955 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.37□□□□□ -0.43
Lbx1P52955 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lbx1P52955 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lbx1P52955 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.37□□□□□ -0.43
Lbx1P52955 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lbx1P52955 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Gm12419-201ENSMUST00000116649 636 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 Gm13286-201ENSMUST00000117750 537 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms