Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.53□□□□□ -0.24
Shmt1P50431 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Shmt1P50431 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shmt1P50431 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Shmt1P50431 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.52□□□□□ -0.24
Shmt1P50431 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shmt1P50431 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shmt1P50431 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.52□□□□□ -0.24
Shmt1P50431 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shmt1P50431 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shmt1P50431 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shmt1P50431 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shmt1P50431 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.52□□□□□ -0.25
Shmt1P50431 Gm13342-201ENSMUST00000121055 207 ntBASIC13.52□□□□□ -0.25
Shmt1P50431 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.52□□□□□ -0.25
Shmt1P50431 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.52□□□□□ -0.25
Shmt1P50431 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shmt1P50431 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Shmt1P50431 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.52□□□□□ -0.25
Shmt1P50431 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.52□□□□□ -0.25
Shmt1P50431 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.52□□□□□ -0.25
Shmt1P50431 Mospd4-201ENSMUST00000180618 576 ntBASIC13.52□□□□□ -0.25
Shmt1P50431 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Shmt1P50431 Gm7046-201ENSMUST00000221351 977 ntBASIC13.52□□□□□ -0.25
Shmt1P50431 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.52□□□□□ -0.25
Shmt1P50431 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shmt1P50431 Gm22058-201ENSMUST00000083393 310 ntBASIC13.52□□□□□ -0.25
Shmt1P50431 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.52□□□□□ -0.25
Shmt1P50431 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shmt1P50431 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Shmt1P50431 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.52□□□□□ -0.25
Shmt1P50431 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Shmt1P50431 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shmt1P50431 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shmt1P50431 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Shmt1P50431 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shmt1P50431 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shmt1P50431 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Shmt1P50431 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shmt1P50431 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.51□□□□□ -0.25
Shmt1P50431 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shmt1P50431 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Shmt1P50431 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.51□□□□□ -0.25
Shmt1P50431 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm13297-201ENSMUST00000120205 934 ntBASIC13.51□□□□□ -0.25
Shmt1P50431 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm27243-201ENSMUST00000183964 521 ntBASIC13.51□□□□□ -0.25
Shmt1P50431 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm7783-201ENSMUST00000204795 781 ntBASIC13.51□□□□□ -0.25
Shmt1P50431 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.51□□□□□ -0.25
Shmt1P50431 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm9368-201ENSMUST00000219348 831 ntBASIC13.51□□□□□ -0.25
Shmt1P50431 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.51□□□□□ -0.25
Shmt1P50431 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Gm24526-201ENSMUST00000082921 158 ntBASIC13.51□□□□□ -0.25
Shmt1P50431 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.51□□□□□ -0.25
Shmt1P50431 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shmt1P50431 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Shmt1P50431 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Shmt1P50431 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shmt1P50431 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.5□□□□□ -0.25
Shmt1P50431 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Shmt1P50431 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.5□□□□□ -0.25
Shmt1P50431 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shmt1P50431 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Shmt1P50431 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Shmt1P50431 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.5□□□□□ -0.25
Shmt1P50431 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms