Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Srp9P49962 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Srp9P49962 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Srp9P49962 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.9□□□□□ -0.67
Srp9P49962 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Srp9P49962 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Srp9P49962 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.89□□□□□ -0.67
Srp9P49962 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Srp9P49962 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.89□□□□□ -0.67
Srp9P49962 Gm15376-201ENSMUST00000122258 783 ntBASIC10.89□□□□□ -0.67
Srp9P49962 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.89□□□□□ -0.67
Srp9P49962 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Gm27437-201ENSMUST00000183429 107 ntBASIC10.89□□□□□ -0.67
Srp9P49962 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Srp9P49962 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Gm42550-201ENSMUST00000201553 960 ntBASIC10.89□□□□□ -0.67
Srp9P49962 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.89□□□□□ -0.67
Srp9P49962 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.89□□□□□ -0.67
Srp9P49962 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Srp9P49962 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Srp9P49962 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
Srp9P49962 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Srp9P49962 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Srp9P49962 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Srp9P49962 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Srp9P49962 Gm15371-201ENSMUST00000117057 784 ntBASIC10.88□□□□□ -0.67
Srp9P49962 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.88□□□□□ -0.67
Srp9P49962 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.88□□□□□ -0.67
Srp9P49962 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.88□□□□□ -0.67
Srp9P49962 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.88□□□□□ -0.67
Srp9P49962 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Srp9P49962 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.88□□□□□ -0.67
Srp9P49962 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Srp9P49962 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.88□□□□□ -0.67
Srp9P49962 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Srp9P49962 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms