Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.25□□□□□ -0.61
GdnfP48540 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.25□□□□□ -0.61
GdnfP48540 Gm12485-201ENSMUST00000119641 291 ntBASIC11.25□□□□□ -0.61
GdnfP48540 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
GdnfP48540 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
GdnfP48540 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
GdnfP48540 Gm26464-201ENSMUST00000157094 305 ntBASIC11.25□□□□□ -0.61
GdnfP48540 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.25□□□□□ -0.61
GdnfP48540 Gm19078-201ENSMUST00000206311 727 ntBASIC11.25□□□□□ -0.61
GdnfP48540 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.25□□□□□ -0.61
GdnfP48540 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.25□□□□□ -0.61
GdnfP48540 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.25□□□□□ -0.61
GdnfP48540 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
GdnfP48540 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
GdnfP48540 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.25□□□□□ -0.61
GdnfP48540 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
GdnfP48540 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.25□□□□□ -0.61
GdnfP48540 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.24□□□□□ -0.61
GdnfP48540 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.24□□□□□ -0.61
GdnfP48540 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
GdnfP48540 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Gm5354-201ENSMUST00000182417 973 ntBASIC11.24□□□□□ -0.61
GdnfP48540 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.24□□□□□ -0.61
GdnfP48540 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.24□□□□□ -0.61
GdnfP48540 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
GdnfP48540 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.24□□□□□ -0.61
GdnfP48540 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
GdnfP48540 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.24□□□□□ -0.61
GdnfP48540 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
GdnfP48540 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.23□□□□□ -0.61
GdnfP48540 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.23□□□□□ -0.61
GdnfP48540 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
GdnfP48540 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
GdnfP48540 Gm11524-201ENSMUST00000119349 807 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms