Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.58□□□□□ -0.56
Rfx3P48381 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.58□□□□□ -0.56
Rfx3P48381 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.58□□□□□ -0.56
Rfx3P48381 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.58□□□□□ -0.56
Rfx3P48381 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.58□□□□□ -0.56
Rfx3P48381 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.58□□□□□ -0.56
Rfx3P48381 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.58□□□□□ -0.56
Rfx3P48381 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.58□□□□□ -0.56
Rfx3P48381 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.58□□□□□ -0.56
Rfx3P48381 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.58□□□□□ -0.56
Rfx3P48381 Gm45668-201ENSMUST00000211271 493 ntBASIC11.58□□□□□ -0.56
Rfx3P48381 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.58□□□□□ -0.56
Rfx3P48381 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.58□□□□□ -0.56
Rfx3P48381 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rfx3P48381 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.58□□□□□ -0.56
Rfx3P48381 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rfx3P48381 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.58□□□□□ -0.56
Rfx3P48381 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.58□□□□□ -0.56
Rfx3P48381 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.58□□□□□ -0.56
Rfx3P48381 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rfx3P48381 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.57□□□□□ -0.56
Rfx3P48381 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.57□□□□□ -0.56
Rfx3P48381 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Rfx3P48381 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Rfx3P48381 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Rfx3P48381 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Rfx3P48381 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.57□□□□□ -0.56
Rfx3P48381 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Rfx3P48381 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.57□□□□□ -0.56
Rfx3P48381 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.57□□□□□ -0.56
Rfx3P48381 Gm11424-201ENSMUST00000121929 829 ntBASIC11.57□□□□□ -0.56
Rfx3P48381 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.57□□□□□ -0.56
Rfx3P48381 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.57□□□□□ -0.56
Rfx3P48381 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rfx3P48381 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.57□□□□□ -0.56
Rfx3P48381 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rfx3P48381 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.57□□□□□ -0.56
Rfx3P48381 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rfx3P48381 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Rfx3P48381 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.56□□□□□ -0.56
Rfx3P48381 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rfx3P48381 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.56□□□□□ -0.56
Rfx3P48381 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms