Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.14□□□□□ -0.47
Cdx2P43241 Gm39404-201ENSMUST00000216350 313 ntBASIC12.14□□□□□ -0.47
Cdx2P43241 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdx2P43241 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.14□□□□□ -0.47
Cdx2P43241 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdx2P43241 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdx2P43241 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdx2P43241 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx2P43241 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdx2P43241 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Cdx2P43241 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx2P43241 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx2P43241 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdx2P43241 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx2P43241 Gm23699-201ENSMUST00000158835 135 ntBASIC12.13□□□□□ -0.47
Cdx2P43241 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx2P43241 Mir7032-201ENSMUST00000185154 79 ntBASIC12.13□□□□□ -0.47
Cdx2P43241 Gm37666-201ENSMUST00000194110 866 ntBASIC12.13□□□□□ -0.47
Cdx2P43241 Gm45598-202ENSMUST00000210719 986 ntBASIC12.13□□□□□ -0.47
Cdx2P43241 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx2P43241 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.13□□□□□ -0.47
Cdx2P43241 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx2P43241 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Cdx2P43241 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdx2P43241 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdx2P43241 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Gm13315-201ENSMUST00000120376 991 ntBASIC12.12□□□□□ -0.47
Cdx2P43241 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Gm9550-201ENSMUST00000161130 862 ntBASIC12.12□□□□□ -0.47
Cdx2P43241 Gm3508-201ENSMUST00000186012 792 ntBASIC12.12□□□□□ -0.47
Cdx2P43241 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.12□□□□□ -0.47
Cdx2P43241 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.12□□□□□ -0.47
Cdx2P43241 Spcs1-203ENSMUST00000226374 592 ntBASIC12.12□□□□□ -0.47
Cdx2P43241 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.12□□□□□ -0.47
Cdx2P43241 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Gm10076-201ENSMUST00000073238 384 ntBASIC12.12□□□□□ -0.47
Cdx2P43241 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdx2P43241 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdx2P43241 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdx2P43241 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdx2P43241 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdx2P43241 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdx2P43241 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms