Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 AC138604.1-201ENSMUST00000226969 739 ntBASIC8.62□□□□□ -1.03
Rpl28P41105 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Gm20445-201ENSMUST00000061905 565 ntBASIC8.62□□□□□ -1.03
Rpl28P41105 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Rpl28P41105 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rpl28P41105 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rpl28P41105 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rpl28P41105 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Rpl28P41105 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Rpl28P41105 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC8.62□□□□□ -1.03
Rpl28P41105 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rpl28P41105 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rpl28P41105 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Rpl28P41105 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC8.61□□□□□ -1.03
Rpl28P41105 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC8.61□□□□□ -1.03
Rpl28P41105 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 AC154262.2-202ENSMUST00000225158 1331 ntBASIC8.61□□□□□ -1.03
Rpl28P41105 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
Rpl28P41105 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC8.61□□□□□ -1.03
Rpl28P41105 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC8.61□□□□□ -1.03
Rpl28P41105 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Rpl28P41105 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC8.61□□□□□ -1.03
Rpl28P41105 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC8.61□□□□□ -1.03
Rpl28P41105 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC8.61□□□□□ -1.03
Rpl28P41105 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC8.61□□□□□ -1.03
Rpl28P41105 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC8.61□□□□□ -1.03
Rpl28P41105 Gm27306-201ENSMUST00000183970 107 ntBASIC8.61□□□□□ -1.03
Rpl28P41105 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Gm17795-201ENSMUST00000214505 757 ntBASIC8.61□□□□□ -1.03
Rpl28P41105 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC8.61□□□□□ -1.03
Rpl28P41105 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Gm8798-201ENSMUST00000211877 1661 ntBASIC8.61□□□□□ -1.03
Rpl28P41105 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Gm5466-201ENSMUST00000119395 1890 ntBASIC8.61□□□□□ -1.03
Rpl28P41105 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Rpl28P41105 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Rpl28P41105 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rpl28P41105 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC8.6□□□□□ -1.03
Rpl28P41105 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Rpl28P41105 Gm1995-201ENSMUST00000220838 2602 ntBASIC8.6□□□□□ -1.03
Rpl28P41105 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Rpl28P41105 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC8.6□□□□□ -1.03
Rpl28P41105 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rpl28P41105 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rpl28P41105 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms